Module 4: What pipelines are available?

Several computational pipelines offer users the computational power to analyze metagenomes on the cloud. We have explored KBase, and we are now exploring several other metagenomics pipelines. We will use Nephele to dig into a different dataset, focusing on data equity and quality control.

Our Unit 4 checklist can be found here.

Article 2 was complex. We encourage everyone to review the annotations and continue contributing. This will help you solidify your understanding of MetaBAT2 and continue learning other processes and concepts.  

We will complete the Nephele activity posted on Moodle. You can work on the Nephele assignment on your own and review progress on Tuesday. 

Podcast script drafts are due for scholar peer review by Friday 5:00 PM. Submit your text online via Moodle and then use the same submission site to review another script. This is your opportunity to learn from others and proofread!

Finally, we want you to review the guidelines for the final data analysis project.

The BIT Metagenomics Team F23